rs47750385 SNP Detail

Summary

• ID
  rs47750385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136862610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCACC TCAGATGAGA GATGGGGGCG
  Y
  GGGGTGAGGT GGGAGAAGAG GAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147595598	ENSMUSSNP5380480	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss321361516	CHEV_4_136691214	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs47750385					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136862610 () rs orientation: forward

Symbol	Name	Function Class
D4Mit68	DNA segment, Chr 4, Massachusetts Institute of Technology 68	1823 bp proximal
Rr602550	regulatory region 602550	891 bp distal
Rr602551	regulatory region 602551	523 bp proximal
Rr602552	regulatory region 602552	1143 bp proximal