rs47734341 SNP Detail

Summary

• ID
  rs47734341
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135621837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGGGCACC AGGCACACAT
  GTGGTGTGCA TACACACATG CAGGCAAAAC ACTCACTCAC ATGCCTATAT GTACATGCAT
  GCACACACAT GCACACTCAC ATGCACACGT GCACACACGA GCATCCACAG GCACATGCAC
  ACATGCTTGT GTGCACATAC CAGGCATGGT GAAGAATACT ATAATCCCAA CACTGGGTAG
  R
  TGGAGACAGC CAGCCTAGCC TTGCGGGTGA ATCCTGGGTT CCAGTGAGAG ACCTTGCAGC
  AAAACTCAAG GTAGATCTAG GAGGATACAA GCTGGCATTC AACTGAGCCA GCAACTGGCC
  CCCTCCACAG TTCTTGCTAT GTCTTCATAG CAAATTCCTC TGTTAGAGGT AATGCTGTGT
  GGAATGGTGT CTTAGCTAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147553122	ENSMUSSNP1485429	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47734341					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135621837 () rs orientation: forward

Symbol	Name	Function Class
Cnr2	cannabinoid receptor 2	868 bp upstream
Rr602181	regulatory region 602181	1377 bp distal
Rr602182	regulatory region 602182	1061 bp distal
Rr602183	regulatory region 602183	465 bp proximal
Rr602184	regulatory region 602184	879 bp proximal
Rr602185	regulatory region 602185	1445 bp proximal
Tssr39650	transcription start site region 39650	654 bp upstream
Tssr39651	transcription start site region 39651	858 bp upstream
Tssr39652	transcription start site region 39652	888 bp upstream