rs47724893 SNP Detail

Summary

• ID
  rs47724893
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141789877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAA AATGATCTTG TCCCATAAAG
  R
  ATGGAGTATG GTGGCTCAGT TGTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147747852	ENSMUSSNP4655528	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss321392307	CHEV_4_141618481	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47724893					SNP	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141789877 () rs orientation: forward

Symbol	Name	Function Class
D4Mit311	DNA Segment, Chr 4, Massachusetts Institute of Technology 311	72 bp distal
Rr603976	regulatory region 603976	1126 bp distal
Rr603977	regulatory region 603977	207 bp proximal
Tmem51	transmembrane protein 51	Intron