rs47724337 SNP Detail

Summary

• ID
  rs47724337
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:178275747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTC ATTGGTTCTC CACCCACTAG
  R
  TGCTGCCGCT GTCCCTGTGT GTATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148366723	ENSMUSSNP5599650	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320628584	CHEV_2_178368659	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47724337					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:178275747 () rs orientation: forward

Symbol	Name	Function Class
Gm40031	predicted gene, 40031	804 bp upstream
Rr572441	regulatory region 572441	487 bp distal
Rr572442	regulatory region 572442	210 bp proximal
Rr572443	regulatory region 572443	1777 bp proximal
Tssr28070	transcription start site region 28070	1871 bp downstream