rs47723635 SNP Detail

Summary

• ID
  rs47723635
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100824093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAAGGTTG GAAGCTGCCC
  ATTTATCACC AAGAGTCAGT ATCGGGGAAC TATTTAATGC CTGTTGTCTC TCATAATTAC
  ATCACCTCAT AATCTATTCC TGCCTTCGTT GCTTCCCTCT TTCCTTCCTT TCTTTAATGA
  CCTTGAACCT GCTATTCCTG CCTCCACTTC CCAAGGGCTG GGATTATTGG CAAGTGCCAT
  R
  CCTGGCTCAG CAGTGAATTT TTAAATAAGC CAAACTATCT AGAACTTGCT GAGTCCTGGA
  GCCTGTTCAA CCCCTTCCTT CCCTGTCTCA GCCCAATTTT AATTTTTTTA TTATAAAGAG
  CTAAACAAAG TTATTGGTGC TTCTATTTTC ATACAAGCTA ATCCCACTAG ATGGCACTAA
  AGAGTCGCAT GTTAGGAATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320850245	CHEV_3_100720700	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47723635					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100824093 () rs orientation: forward

Symbol	Name	Function Class
Gm40108	predicted gene, 40108	1557 bp downstream
Rr581925	regulatory region 581925	66 bp proximal
Rr581926	regulatory region 581926	160 bp proximal