rs47714861 SNP Detail

Summary

• ID
  rs47714861
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95183835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACCATCC CCTAACATCT
  ATTTCAGAGG ATCTGACACC TTCTTTCTTT TGAGAGCAAC AGGCATGCAT GTGATGTCCG
  TATATACAGA CAAGAAAAAT ACTCATACAC ATAAAAAAAT AGGTCTAAAA AAATTTGGTT
  TTAGAGAAAA AGGAAGACCA TTAGTTGAAA TAATATATCC TGAAGTGTCT GTCTGTCTGT
  Y
  TGATGGCCTG GAAGGCAGGC AAGAAGAGGG TTTAGGGGGG AAAAAAAAAC CACTTCCCTT
  CTGAGGATGA CTATGGTCGA TAGCTAACAG AAAAACTGGG GCCTTCGATG AAAGGATGAG
  CCGCCATCCT CTCTGGGTTG CAGTGTCCTG CCTGAGAAGT GCACCTTTGT TCCTAACTCA
  GCCTAAAATG TAGCCCCACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135510452	ENSMUSSNP251994	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47714861					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95183835 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580883	regulatory region 580883	1860 bp distal
Rr580884	regulatory region 580884	433 bp proximal