rs47668038 SNP Detail

Summary

• ID
  rs47668038
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135002844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGACATTTT CCAAGTCCTG
  AGGTGGTCCA AGTCCTGCCC TTGCTCATCC GGACACCCTC AGGCACTGGC TCAGACCTGG
  AACCTGTGCT CAGGAACCTG GTCACAGTCA TGCCTAGGGG TCTCAGTTTC TACTCTGATG
  CTCATGAGCA TGGGAGCACA GACAGATCTG GGAGGAGGAG GAAGAGGAAG ACGAAGAGGA
  G
  AGAAAGTGTT TATTCCGGGA GGTCCTACAG CACCTTGCTT CCAACTTTGA AAGGCAAGAC
  GTTCCTGCCC TGTGCTCCTG GTTGTTTTTG TAACACAGAG AAAGCTTGAA GATGGGTGGA
  GGTGTGTTCT CCTTACACAC CCCTCTGACC TCATTCCCAC CTGCTCCCCC TTGTGTGCCC
  CACCCCAGCT GCAGCAGCTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147543413	ENSMUSSNP6255809	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47668038					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135002844 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15068	CpG island 15068	1910 bp distal
Rr601982	regulatory region 601982	121 bp distal
Rr601983	regulatory region 601983	1281 bp proximal