rs47635350 SNP Detail

Summary

• ID
  rs47635350
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:139972338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTC TCTTCAAAGA CTCAGGCGGT
  T
  GGAGGGTGTA GGTTATTTTA GAGGC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147694915	ENSMUSSNP4439659	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs47635350					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139972338 () rs orientation: forward

Symbol	Name	Function Class
Gm69798	predicted gene, 69798	1377 bp upstream
Gm69835	predicted gene, 69835	1892 bp downstream
Igsf21	immunoglobulin superfamily, member 21	Intron
Rr603404	regulatory region 603404	809 bp distal
Rr603405	regulatory region 603405	388 bp proximal
Rr603406	regulatory region 603406	1747 bp proximal
Tssr44245	transcription start site region 44245	1724 bp downstream
Tssr44246	transcription start site region 44246	1767 bp downstream
Tssr44247	transcription start site region 44247	1891 bp downstream