rs47629679 SNP Detail

Summary

• ID
  rs47629679
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129715043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTG TCCCGCTGAT CTCCAAGTCT
  Y
  TTTCTGCCAG TACCGTGCTG CTTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320505892	CHEV_2_129698859	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47629679					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129715043 () rs orientation: forward

Symbol	Name	Function Class
Gm75517	predicted gene, 75517	1126 bp upstream
Rr564987	regulatory region 564987	1537 bp distal
Rr564988	regulatory region 564988	401 bp proximal
Rr564989	regulatory region 564989	588 bp proximal