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rs47622259 SNP Detail
Summary
  • ID
    rs47622259
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr4:9569676 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          CCCTG CAAGGGTGCT ATTCCTCAGA
    R
    TAATGATATG GAGTCTGCCT TCTCT                                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
LG/J
SM/J
ss145989085 ENSMUSSNP782420 ENSEMBL ENSEMBL_Sanger f SNP A G G
ss321039170 CHEV_4_9496823 CHEVERUD SCREENING_POP f SNP A G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
LG/J
SM/J
rs47622259 SNP A G G A G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:9569676 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Asph aspartate-beta-hydroxylase Intron
D4Mit263 DNA segment, Chr 4, Massachusetts Institute of Technology 263 170 bp proximal
Gm19130 predicted gene, 19130 287 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory