rs47620740 SNP Detail

Summary

• ID
  rs47620740
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117737248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGAATTGGAC CTAGGTTTGA TTACTGGGAC CCAGTGGTAG
  GAAAATAGAA CTTACCCCTT TAGGTTGCCC TCTGATCTCT AGTAGTGCAC TGTGGATTTG
  C
  GGATTTGTGC AGTATGTATG TGAGGGTTGA GAGTTGGAGA GATAGCTCAG TGCACAAAGA
  ACTTGCCCAA CAATCCAGAG GAACTGCGCT CAGATCTCTA T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133580904	ENSMUSSNP1424615	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47620740					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117737248 () rs orientation: forward

Symbol	Name	Function Class
Rr637359	regulatory region 637359	1479 bp distal
Rr637360	regulatory region 637360	1575 bp distal