rs47615605 SNP Detail

Summary

• ID
  rs47615605
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66444519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATGGTGAG CACCGTGGGG GAGCACGGAT GGAGAGGGAG
  GCTCCTGGGC TCTGGGGCTC TGGGGCTCTG GGGTGACTGT CCAGGCTGCA CCTCTTCTTG
  S
  ACTTGCCACT TCTCATCTCC AAGGAAGGAA GTAACCCATA GAACATTTAC CTTCTCCCAT
  CCCTCAAGGT CAATAAGAGG CTGAATGTCA TCCTCTGTCC                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss63152025	NES17452116	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	G	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs47615605					SNP	C	C	C	C	G	C	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63152025	NES17452116	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66444519 () rs orientation: forward

Symbol	Name	Function Class
Gm15958	predicted gene 15958	within coordinates
Rr539711	regulatory region 539711	20 bp distal
Rr539712	regulatory region 539712	1400 bp proximal
Rr539713	regulatory region 539713	1442 bp proximal