rs47606533 SNP Detail

Summary

• ID
  rs47606533
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60959030 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATAAGTT TCTGACATGG
  ATTTTGGCCT GGAGATTTTG AGGCATAGTG GCTATGAGTC CCAGGAATCC AAGGCAAGGA
  GAGCTGAGTT TAAGGTCATC TGGGAAAAAG CAAGTCAGAT CCAGGCATGG CAGCACACAC
  CTTTAATCTG ATCCACACCT TCTGCTGGAG AACTACAGAA GGACATTGGA AGAAGGAAGA
  Y
  TCTCTCTTCT TTACCTGCTT GCTTTGTGGG ACTGAGCAAG TGCTAGATCC TTGGACTTCA
  TTCACAGCTG CTGCTGATCA TTGTTAGGGA GTTGGACTGC AGTCATCAAC AAATTCCTTT
  ACTATAGAGA GAATGCCCAT ATGTTCTGTG ACTCTAGAGA ACCCTGACTA ACACATTTCA
  TAAGGAAGGA ATTATCATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss135222432	ENSMUSSNP376766	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs47606533					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60959030 () rs orientation: forward

Symbol	Name	Function Class
Rr577470	regulatory region 577470	979 bp distal