rs47603727 SNP Detail

Summary

• ID
  rs47603727
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:94485688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCT TGGGGTTACC CCGACTCTCT
  R
  TCTGTCCTAA TTCTTTGAAT ATTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133401083	ENSMUSSNP7086903	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss321868760	CHEV_6_94458701	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47603727					SNP	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94485688 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr379776	regulatory region 379776			67 bp upstream
Rr634884	regulatory region 634884			164 bp proximal
Slc25a26	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26			Intron
				Noncoding-Transcript-Variant