rs47587044 SNP Detail

Summary

• ID
  rs47587044
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:48461267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTGAGAA GTCCAAGCTG
  CAAGCTAGTG ACTCTCACCA CTGAGGGAAG AGATGGTTTC TTCCCTGTTC AGTCCAGTCT
  TTTACCCTAT TGTTCTTGAG TGGTGAAGAC CTTTGCCACT CTGGCTTCAC ACCTGACCTG
  AGTCCCTGGA AGTGTGCAGA TCCGCGGCCA CCCACATGCA GGTACGCTGC CGAGAGCTGT
  R
  TAGAGCCGAC ATCCCTTGGC TACAGGGAGA ACCTGAGCAA CCAAAACCTG CCATATTGCT
  TCCTTTTCTC TTTTTCTTTT AGTGACACGG AGGTAATACC TGCGCACACA TACATTTGGA
  CTATGTAGAA ACGTGGCTGT GTATTCTCCT TTTTCATTCT TTTTCTGGTT GTTTTTATTT
  TTGTGCACAC GTGCCTGACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60605647	NES16305831	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47587044					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60605647	NES16305831	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:48461267 () rs orientation: forward

Symbol	Name	Function Class
Gm32052	predicted gene, 32052	within coordinates
Tssr81265	transcription start site region 81265	839 bp downstream