rs47581708 SNP Detail

Summary

• ID
  rs47581708
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:150199443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCACAGTCT GGAGGCACCT
  CCACAGGGTG GAATGTTTGC AGCTTGGAGT CACTGAGTGT GACTCTCAAC AGTCTTCATT
  GTTTACTCTT GAAACCCAGG AAGATACAAC ATCTGGTCAG GTTTAGGGAC TTCCTGAAAA
  TATTTTTGAA CTATTTGCCT TCTCTCTTAA AAGCAGTTTC AATCTCAGAG AAAGATGCCA
  Y
  GTGACAGGTT TATAGCAGAC GCAGCAGAAT TAAACCTTGA TCATCCTGGC AGGACTGAAG
  CTCACATATC AGGCTGTGCT TGGCAGAGAA ACAGGCAGAG GTTGTAGTAA CTGTTTCCTC
  CCAGCTTTGT TCTTCCTAAG AATTGACCCA AAGCATCTCA CCCCAGCCGT ATCATTTTAT
  AAGTCCAGAG ATTACCTATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss136082460	ENSMUSSNP6094289	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321021779	CHEV_3_150156770	CHEVERUD	SCREENING_POP	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47581708					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:150199443 () rs orientation: forward

Symbol	Name	Function Class
Rr587370	regulatory region 587370	within coordinates