GTGTATGTGT GTGTGTATGC ATATGGAAGC TGGATGCAGT GGCCAGCACA GCACTTCTGC GTTGGAACAC CTGGAACTCT CTGCTCCTCT TGGGTGCTTC Y TCTCCAAAAG GAAGGATTGG AGGGTGAGGT GCAGGAAGCA GCATGGACCA GCCTGACTAA GCACTTAGAG CCAGAGCAGG GCCTGAGGGC CACGCCCCC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss147551869 | ENSMUSSNP1195708 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | ||
ss325701890 | CHEV_18_77742792 | CHEVERUD | SCREENING_POP | f | SNP | T | C | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs47570725 | SNP | T | T | T | C |
Location: Chr18:77591749 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ark2c | arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Cpgi10275 | CpG island 10275 | 1507 bp distal | ||||||
Rr541132 | regulatory region 541132 | 1453 bp distal | ||||||
Rr541133 | regulatory region 541133 | 886 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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