rs47570528 SNP Detail

Summary

• ID
  rs47570528
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:114686096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGAATATT TATGTCTTCT TTTTCAAATG CATTGCCCAT
  GAATGTCACA GCTGTCAAAC GTCTGAACAC AAGAAGATAA AAAATGAAAT TAATAAAAGA
  C
  AGATCAACAT TTAGTTTGTT GGGGATATCC TCTCTACCAG CATTTTTCTT TTCCTTAAAA
  AAAAAAAGAA CCAATATCTG GATGTTTTAA ACTCAGCTG                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147254889	ENSMUSSNP2891765	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47570528					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:114686096 () rs orientation: forward

Symbol	Name	Function Class
Gm13974	predicted gene 13974	within coordinates
Rr1575	regulatory region 1575	1113 bp distal
Rr562876	regulatory region 562876	1502 bp distal
Rr562877	regulatory region 562877	1560 bp distal
Rr562878	regulatory region 562878	1076 bp distal