rs47566544 SNP Detail

Summary

• ID
  rs47566544
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138595810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCT TAGAGGAGAA GGCTAGGGAT
  K
  CGAACTCTGC TCCTCTCGCT TGTTC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147659297	ENSMUSSNP2592705	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
ss321377662	CHEV_4_138424414	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs47566544					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138595810 () rs orientation: forward

Symbol	Name	Function Class
Gm32930	predicted gene, 32930	648 bp downstream
Rr398630	regulatory region 398630	1728 bp downstream
Rr603035	regulatory region 603035	1643 bp distal
Rr603036	regulatory region 603036	1886 bp distal
Rr603037	regulatory region 603037	1116 bp distal