rs47556301 SNP Detail

Summary

• ID
  rs47556301
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12774427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CTTGGACAAT CTGCTTAACA TATTGCACCT TCATTCTACA
  CTTGTAAAAT GAAGCTACAG CAGGAGCAAA CTTCACAGGG GCTAAGACTT ATAAGGGCAG
  Y
  TAAAGCACTT ACCAAATACG GACAGACACT GGTCAGCACA TCTATGTCTG CACGCTCATG
  CTTCACACTG AAGCATAGAA ATGTAGGAGT ATGGATTCTC T                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146024469	ENSMUSSNP2904708	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47556301					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12774427 () rs orientation: forward

Symbol	Name	Function Class
Gm69806	predicted gene, 69806	within coordinates
Rr589101	regulatory region 589101	380 bp proximal
Rr589102	regulatory region 589102	1457 bp proximal