rs47554221 SNP Detail

Summary

• ID
  rs47554221
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153417669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGGTGGCA GCTGTGCTTG TGAGGCCCAG AGCAGCTGTC
  TCCAAAGGAG CACGGGAGGG ACCAGGCCTG AGGGAAAGGT GGAGGTCCCC TTCCCCCTCT
  G
  CTGCTCAATA GGCAGAGGTC CAGCCTCCCT GGCACTCAGG GAGCTGCCCT GGGCGTGGGG
  AGGAGCGTGT GGGGTTGGGT GGCCGGTTGC CTTTATTGG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147997060	ENSMUSSNP6992213	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs47554221					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153417669 () rs orientation: forward

Symbol	Name	Function Class
Rr567686	regulatory region 567686	within coordinates
Rr567687	regulatory region 567687	1311 bp proximal
Rr567688	regulatory region 567688	1956 bp proximal