rs47536110 SNP Detail

Summary

• ID
  rs47536110
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131509028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCACCATG CCACTTATCA
  GATGGGCTAT TCTGGTATCA TGATGTTTGT GCTTTTTAAA GTCATGAAGG CCTGAGAACA
  CTGCTGCCAC AACTCTTATC TCGGTACACG GTTATATTGT TCTATTTTTA TCATTGGTTA
  TCATTAACCT TTTACTGTGC TCCATTCATA AATTAAACTT TATCTTAGGG ACTCTGTAAG
  R
  AAAAGACTGT TAGATTTTAT AGATTCCACA ATGTCTTGTA ATGAATATAT ATCCCTTGTG
  GGTGTATGGG GCTACTGTAA ACAATTTTCT TTTGATATTT ACCATTTTTG TTTAAGTCCA
  CTTAAGAACT CCCACAGGAT AAAACATTAA ATTAGTTTAT CTGAGTTCTT TTCTATATAC
  AAATTATCAG CCTTTCCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135905487	ENSMUSSNP4828470	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47536110					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131509028 () rs orientation: forward

Symbol	Name	Function Class
Rr375748	regulatory region 375748	762 bp downstream
Rr585381	regulatory region 585381	61 bp distal