rs47534791 SNP Detail

Summary

• ID
  rs47534791
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101469370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGGAATC AGTTCTTTTC
  TTCTCTCTTA CAGCAGAGTT TCTCTTTGGT ATTTCTTCTA TGCTATGTGC TCCAAGCTAG
  CTAGACAGTC TCCTGCCTCT GTACCCCTAT CCCACTGTAA AGCTGCTAGG ACTACAGGTG
  TGCACCACCT TATCTGGCTT TGTCCCAGAT TATCAAGCTT ATCCAGCAAG TGCCTTTACC
  K
  ACTGAGTCAT CTCTAGCCCT CCCCAACCCT TCATTCATTA TATGTATGAA ACAGATGCCG
  TTGTGTGCAC AGAACTATGT TTGAGTTGTG TGCACAGAAC TATGTTTGAC TGGCTTTGGT
  AAGCGAATTC AAGGACAAGT CGCACACTAC CCAAACCCTC CAAGCCAAAG CTGGGAGCAC
  AAGAAGGCCT GGCCCTGCAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135548582	ENSMUSSNP1833238	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss320852560	CHEV_3_101365977	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47534791					SNP	T	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101469370 () rs orientation: forward

Symbol	Name	Function Class
Rr582081	regulatory region 582081	437 bp distal
Rr582082	regulatory region 582082	529 bp proximal