rs47529995 SNP Detail

Summary

• ID
  rs47529995
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93096686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCC ACTTTTTTTT TCTCTCTCTA
  R
  GAATCCCTGG AACCCTTGTG ATACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss146940983	ENSMUSSNP321064	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss320395278	CHEV_2_93106498	CHEVERUD	SCREENING_POP	f	SNP			A		G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs47529995					SNP	A	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93096686 () rs orientation: forward

Symbol	Name	Function Class
Rr561140	regulatory region 561140	242 bp proximal
Rr561141	regulatory region 561141	1392 bp proximal
Tspan18	tetraspanin 18	Intron