rs47526608 SNP Detail

Summary

• ID
  rs47526608
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102277036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCCATGAC TCATAAATAG
  CTTCTAATAT CTGAGGAGCC TGCAAAATTC CACAGCTCAT CGCTCCCCGA AACTAACGGG
  CCATGTGAAA AACAGAACTA CAGTCTCCCC GTAAGGAAGA GGGAGGTACC TATGCTAACT
  CTACCACAGA GGACATCTTC AAAAATAGAT GCCCTAGTGT GGCGACCATG TTGTCTAGGT
  W
  TCTCTTGCCA GACTCATTCA CTCCTCTCCA GCCCGTAGAA AGTGTTCTTA TAACCACAAT
  GAAAAGGCTG GATCATGGGA GGATTCAAAG CGTCTGGGGA TTTGACTCAG CTGAGGAATG
  ATACTCCACT TTAATAAATC CCCGTTGTGG TTGCTGAGTG CCAGGTACTC TTCTGAGAAG
  CTCGTCAATA TTTACTCATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147112228	ENSMUSSNP1274310	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320437722	CHEV_2_102286848	CHEVERUD	SCREENING_POP	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47526608					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102277036 () rs orientation: forward

Symbol	Name	Function Class
Rr561693	regulatory region 561693	1133 bp proximal