rs47526167 SNP Detail

Summary

• ID
  rs47526167
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151478119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTCTCAGT CTTTCCCAAT
  ATATAATATA ATGTTAATAT CCAGTATAAT GTTATATAGA ATAATGTTAA CTATGGGTAT
  CTTAAGTATA CTAGTTTGAA ATATGCCCCT TGTGTTCCAA ATGTTACAGT GAGCTTCATC
  AAGGAACATT TCTGATTCAT TAGAATATTC ACATGATTTC ATAGGATATT ATCCTACACT
  Y
  TAAAGATATT AAAGATTTCA CTAAGATCTG ATAAAGACGT TCAACAAATA GAAATGGGGC
  TTAGTTTGAA GCTCACCAAG CTTCAAAAAT ATAACTAGAG ACAGACCTAC AAGGGGGGGA
  AAGCTCACTA CTATGAAAAC TTTAAAACAT TGAGGAAGAA ACTGGATGGT CTCAGGTTCA
  GGGGTGGGGC TTGGGGGAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136098038	ENSMUSSNP5180785	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47526167					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151478119 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1423 bp distal
Rr587416	regulatory region 587416	1096 bp distal
Rr587417	regulatory region 587417	1165 bp distal