rs47512472 SNP Detail

Summary

• ID
  rs47512472
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147515182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCATCCCT CATGTAATCT GGAAAATTCT AGTATACTGT
  ATAACCTAAA GGTAGGTCAG TATGTCAGAG AGTATCCTTT CCTGTTATAT CCCTTGGTCT
  A
  AGCCTCTTCC AGATGGCTCA GTTTATATGA GAGTCTTTTA AGCAGCTTGA TTGGTCTCTG
  TGTCTCTCAG GTGGCCTGGC TGGTCTGTGA GTGTCTCTC                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147959815	ENSMUSSNP1720253	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47512472					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147515182 () rs orientation: forward

Symbol	Name	Function Class
Rr398814	regulatory region 398814	1655 bp downstream
Rr398815	regulatory region 398815	1214 bp downstream
Rr398816	regulatory region 398816	308 bp downstream
Rr398817	regulatory region 398817	264 bp upstream
Rr604487	regulatory region 604487	1430 bp proximal