rs47511483 SNP Detail

Summary

• ID
  rs47511483
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52815083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCCCCAC CCAACCCCCC
  AAAAAGAAGA ATTCTAAAAT TTCATTTAGA AAGCAAATAA TTAAAAACAT CAAATAAACA
  AACAAATCAA AACAAAAACA ACCTAACCCC ACACACAGCC TGCAAAGCAC AAAGGCCATT
  TTATAAGAGC TGATTTAGGC CATGGTTAGA CGGGTTAGAA CTATTCCAAG AGCAGTGGTG
  R
  AGCTTGGGGC CACTTGGAGC TGGTGCTTAA TAGCCCTCTT CCTTCACTGC TTGGATACTT
  ACATAAAAAC TGCTATTCTG TGTTGTGACT GCAGGTATGG TTGTTGGAGG TACCCTTGGA
  AATGGCATAC CTCTCTCTCT TTATTTCCTT ATAGAAAGCA CAAAAGGTCT TTTAAAGTCT
  GAGTTTTGAA GTTGCTGCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135179445	ENSMUSSNP917060	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss320765874	CHEV_3_52711584	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47511483					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52815083 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	within coordinates
Rr576600	regulatory region 576600	226 bp distal
Rr576601	regulatory region 576601	287 bp distal