rs47506029 SNP Detail

Summary

• ID
  rs47506029
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27158200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGTTTCCC CTTTAAATCC
  ATAAATCTAG ACTGAAAAAG ATCAATGACC TCATTCTTCA GGCACTGAGA AGCCACAAGT
  TAGCATGACC AGGCCTGTAA CTGCAGAACT GTGAATACCA TCTTTTAAAG TACAAGGAGA
  AAGCCTGATA AAACTCAGAA CTGACTGAAA TGCCAAACTA CAAGCAAATT ATTAAACAAT
  R
  TGTCCTACAA TTACAATGGC TATTTATTTT AAAAGGCTAT TTAAAATAAA ACAAAAGTTA
  ACTATGTATG CCTATTTTGC TCTCCACCAT TAGCAGCCAA ACAGCTTATT TTGCTAAAGC
  TTTCTTAGTT TCTTCACGTT TCTTCACACT TGGGGCCGAA GATGTCGCCC AGGCATTAAC
  TGATACACTG CTGTAGCAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134702083	ENSMUSSNP7031311	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47506029					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27158200 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574344	regulatory region 574344	695 bp distal