rs47504990 SNP Detail

Summary

• ID
  rs47504990
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7829462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGACCTTTGG TCACTCTGGA
  TAGTCTTTTC TTTTCTAGAA AATCAGCTGG TTGTAATCAT GCAGCACATA GTCTTTTGAG
  ATGTTTTTTT TTTTTTTTTT TTTTTTTTTT TTCTTAGTAG CATGCCTGGA AGACTCCATT
  GTATCTTTTA GTATCTTGGC ATTTTTTTTT TTTTTTTTAC TGTTGAATAG CATTTGTACT
  A
  ATACTGATAT CATTTCTCTG ACCAATTACC CAACAGGAAC AACCTAAGAA AGGAAAGGTT
  TATTTGGACT CATGGTCCCA GAGAAATTTC AATCCGTTGT GATAAACAAA GCAGGGTGGC
  AGAATCCATT TGTGGGGATG GCAGGATATA GTAGGGACTC CTCACATGGT GGTAAATCAG
  AAAACATAGA AAAAATAGGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss132955693	ENSMUSSNP530202	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs47504990					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7829462 () rs orientation: forward

Symbol	Name	Function Class
Rr626323	regulatory region 626323	1386 bp proximal