rs47491581 SNP Detail

Summary

• ID
  rs47491581
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7559569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTGGAAA TTTTCTCTCT
  TTTTTAAATT AAATTTGGCA AAGGTTTGTC AATTGTATTC ATTTCCTTAA AGAACCAACT
  TTGGTTTACT TTAAAATTTT ATTGAGAGAG TGATATATAT GAGGATTTAG AGAGAGGAAA
  GGGAAGGGAG AACTGTTTTA ATTATATTAT AATCTTAAAA AGTAGTAGAA AATCATTGAA
  W
  TAAGTAAATT TTTCAAGTAA TTGAGACTCT ATTCATTTTC TGTAGCACGA TTTGAAGAAT
  CGAGTTTTAT GATGTTTTCT AAATAACAAA TCAAAAAGTG TACATATCAG AAAGTACATA
  AGAAAGATAA TGATATTGCA TTACATATTA GGATATTTGC AGGTAAACTT ATTTACATTT
  CACAACATAG AACTTAAAGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134557399	ENSMUSSNP1406169	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47491581					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7559569 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Rr573246	regulatory region 573246	1836 bp distal
Rr573247	regulatory region 573247	1727 bp proximal