rs47479024 SNP Detail

Summary

• ID
  rs47479024
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:8241911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCACTAC ACAGTTGTGT
  TAGGACAACT CAATCAAAAC AAACATCAGC ATCTCAAAAC AAAAAACTAT AGCACTAAAG
  ATAACAAGGT TAGGGCTGGA GAGATGGCTC AGCGGTTAAG AGCAGTGACT GCTCTTCCAG
  AGGTCCTGAG TTTAAATCCC AGCAACCACA TGGTGGGTCA CAACCATATG TAATGGGATC
  K
  GACCCTCTCT TCTGGTGTGT CTGAAGACAG CTACAGTGTA CTCATATACA TAAAATAAGT
  AAATAAATCT TTGTTTTAAA AAAATAAAAA GATAACAAGG TTCTTTTCTG GTCACTGTCT
  TACCTGGCAA AGTTTTGTTT GTTTTCAGGG AGCATTGCAA AACCTTAGTT TGGAGGAAGA
  AAAGGACTAT ACTTGTTCAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss132964790	ENSMUSSNP1461882	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47479024					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8241911 () rs orientation: forward

Symbol	Name	Function Class
Rr626362	regulatory region 626362	915 bp distal