rs47474269 SNP Detail

Summary

• ID
  rs47474269
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131509027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGTCACCAT GCCACTTATC
  AGATGGGCTA TTCTGGTATC ATGATGTTTG TGCTTTTTAA AGTCATGAAG GCCTGAGAAC
  ACTGCTGCCA CAACTCTTAT CTCGGTACAC GGTTATATTG TTCTATTTTT ATCATTGGTT
  ATCATTAACC TTTTACTGTG CTCCATTCAT AAATTAAACT TTATCTTAGG GACTCTGTAA
  R
  GAAAAGACTG TTAGATTTTA TAGATTCCAC AATGTCTTGT AATGAATATA TATCCCTTGT
  GGGTGTATGG GGCTACTGTA AACAATTTTC TTTTGATATT TACCATTTTT GTTTAAGTCC
  ACTTAAGAAC TCCCACAGGA TAAAACATTA AATTAGTTTA TCTGAGTTCT TTTCTATATA
  CAAATTATCA GCCTTTCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135905484	ENSMUSSNP5028558	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47474269					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131509027 () rs orientation: forward

Symbol	Name	Function Class
Rr375748	regulatory region 375748	761 bp downstream
Rr585381	regulatory region 585381	60 bp distal