rs47471672 SNP Detail

Summary

• ID
  rs47471672
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130847304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGACCTCGAT AGCAGGATTA CTCGAGTCCA GGAGTTTGGG
  GATAGGTTGA ACAACATAAT GAACCCATGT CTCAAATTTC TAAAAAGTGG GGGTGCTGGA
  R
  AGGTGGTTCG AGCAGTAAAA GGCCTGCTAT GTATGCAGTG GGACTGAAGA TCAGATCGCC
  AGAAACTACT TCCCGAAGCT TGTTGTAGCT GTGCATGGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135903382	ENSMUSSNP2214876	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss320967455	CHEV_3_130756573	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47471672					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130847304 () rs orientation: forward

Symbol	Name	Function Class
Gm65588	predicted gene, 65588	within coordinates
Rr585257	regulatory region 585257	600 bp proximal