rs47471620 SNP Detail

Summary

• ID
  rs47471620
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19373833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTGCAAC CCCCAAAGAT
  ACAGAAACAA GCATTTTCAG ATACTTGTTT GCCATTGTTC ACAGATCTCA GAAAGTGGAT
  ACAATCCAAA CATTATCAGC AGATGAATGA ATGTAGCCAA ATGTTGCCTC TATGTACAAT
  GGAATATTAT TCAGCCTTAG AAATTCTGAT GTATCCTATA CAGTAGATGA TCCAATAGGG
  A
  CATTTTTCTC AGTTAAATAA GCCACAGACA CAAAGAAAAA TAATCTATGA TTCCATTTAT
  ATGATATAAC TAAAAAAGTT CAATTCATAG AAACCAAAAA TAAGATGGAG TTTACCAGTG
  GTTGGGGAAA GAGAATATGT CTAGTCCATT TTCTGCTGCT ATAACAAAAT AATAGTGTAG
  GAGGCTTATA AAGATTAGAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss134666666	ENSMUSSNP4213451	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs47471620					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19373833 () rs orientation: forward

Symbol	Name	Function Class
Rr573974	regulatory region 573974	52 bp distal