GCACTCTGGG AGGCAGAGGC AGGCAGATCT CTGAACTTAA GGTCAGCCTA GTGTACAGAG CCAGTTCCAG GACAGCCAGG GTGACACAGA GAAACCCTCT CTAGACACCC CTACCAAAAT AATGCATGCA CTTTGGGTAT GGTCATGACA CTTCATACCA GGAAGCTGAG GTGGAGACTA GTATAGCATG AACACCCAGT R CCAGATCGGT CATGGCTACA CAAAAAGATC AAATATCAAT AATACCAGTA AGTTTTGGTC TTGTTCAAAG AGACTCACTT TTCATTTAGA GCTATTCCAG CTGCAATTTT GATACGGCCC ATCATATTTC AAAACTAGAT CCTTTCTGTA TGTTAACCCT ATATCAACCT GTGCCACGTA TTAGCTCTCC CTTATATCTC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss61089577 | NES16605924 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs47462522 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss61089577 | NES16605924 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr3:141686354 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Bmpr1b | bone morphogenetic protein receptor, type 1B | Intron | ||||||
Rr586376 | regulatory region 586376 | 1096 bp proximal | ||||||
Rr586377 | regulatory region 586377 | 1528 bp proximal | ||||||
Rr586378 | regulatory region 586378 | 1661 bp proximal | ||||||
Tssr35923 | transcription start site region 35923 | 1613 bp downstream | ||||||
Tssr35924 | transcription start site region 35924 | 1631 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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