rs47460135 SNP Detail

Summary

• ID
  rs47460135
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148790779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTCT GGAACTCTAC GCTAGCTTCT
  T
  TCCCTGGTCA CATCGCTTAC TTCTG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148016996	ENSMUSSNP3873764	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321422330	CHEV_4_148080431	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs47460135					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148790779 () rs orientation: forward

Symbol	Name	Function Class
Rr406288	regulatory region 406288	1803 bp proximal
Rr604736	regulatory region 604736	1168 bp distal
Rr604737	regulatory region 604737	1382 bp distal