rs47457739 SNP Detail

Summary

• ID
  rs47457739
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135751544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGATCTCTG AGTTTGAGAT
  CAGTCTAGTC AACATAAGGA GTTCCAGGAC AGCCAGGACT ACATAAAAAG ACCCTGTCTC
  AAATAGATGG ATAGATAGAT AGATAGATAG ATAGATAGAT AGATAGATAG ATAGATAGAT
  AGACAGACAG ACAGATAGAA GCTTTGGCTC ACTGATACAA TGTTTGCTTA GCTTGTAGGA
  A
  GTCCTGACTG CCATCTCCTT TCCTTACACA AAGAATAACA AAATAACTGA GTACTTTCAA
  ATGTCCTGCA TTTATATACA TTGTATCCAG TAGTAGCCTG CAAGCTTCCT TTAGCTATTT
  ATCTTGCTTA TTTTGGTTGT CTTTTCATTC TTTGAGCTCA GAGAGTGTCT CTGTGCTCTG
  TAGCTGATAG ATGCTCGATG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147556047	ENSMUSSNP5278590	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47457739					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135751544 () rs orientation: forward

Symbol	Name	Function Class
Gm68304	predicted gene, 68304	within coordinates
Rr602242	regulatory region 602242	1269 bp proximal