rs47447788 SNP Detail

Summary

• ID
  rs47447788
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117668601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GGCTCCATAG CAGGAGCTCA CAACATGACC CAGGCATTCT
  TTCCCTTAGA ATGATACGAC CCTTGGCTGA TGTGTTGTTA GTGACATTGG TTTCATCATG
  R
  TGTTTTTTTT TTTTATTTAA GATTTATTTA TTGGTTATAT GTAAGTACAC TGTCGCTGTC
  TTCAGACACT CCAGAAGAGG GAGTCAGATC TCCTTACAGA T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147294292	ENSMUSSNP4123705	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47447788					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117668601 () rs orientation: forward

Symbol	Name	Function Class
Gm68791	predicted gene, 68791	1439 bp downstream
Rr598215	regulatory region 598215	1584 bp distal
Rr598216	regulatory region 598216	264 bp distal
Rr598217	regulatory region 598217	67 bp proximal
Rr598218	regulatory region 598218	1492 bp proximal