rs47445867 SNP Detail

Summary

• ID
  rs47445867
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100384915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAA CAGCCTCCGG CATCAGGGGG
  Y
  GCTTGCTTTT CACCCCAGGA GACTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147112531	ENSMUSSNP5969642	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47445867					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100384915 () rs orientation: forward

Symbol	Name	Function Class
Rr596001	regulatory region 596001	within coordinates
Rr596002	regulatory region 596002	within coordinates
Rr596003	regulatory region 596003	104 bp proximal
Ube2u	ubiquitin-conjugating enzyme E2U (putative)	Intron
Ube2uos	ubiquitin-conjugating enzyme E2U (putative), opposite strand	within coordinates