rs47437877 SNP Detail

Summary

• ID
  rs47437877
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145409026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATACACAA AAAATGGGCA
  CCTAGCTATA AATAAACCAT TGGAAACCTT TAAATACAGT AATAGCTTTA TGAGGTAGCT
  AGAAATATGA CTTCCCTATT CCACAAATAA CATTTGTGAA TACCGTAGAA TTCCAGCACA
  GAATATAACG GTATTTAACA GCTCACTCAC TCATTTGCTG CAAAGGCCAT TGTGGGGAAG
  R
  AAGAAAGAGA ACTCATCTCT GGTTGTTACT CTCTGTAACA ATTGCAGGTT ATTTAGAGCT
  TGTCCTCTCC TCAGCCTGGG AGGATGAGAG TTGATTTGTT GGATGTACGT GCAATCTAGA
  AAGAAACCCT GGGCCTGCTT CCCATGCTTG CGAGGGGACA GTCTCATCCC TTTTAATGAC
  TTCCTCCATC CCTCTCTGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss136039625	ENSMUSSNP1457793	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs47437877					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145409026 () rs orientation: forward

Symbol	Name	Function Class
Rr586822	regulatory region 586822	972 bp distal
Rr586823	regulatory region 586823	within coordinates