rs47432180 SNP Detail

Summary

• ID
  rs47432180
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162069939 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGTATCTG ACACTCCTGC GGATTTTCCC GGGTCAGGAG
  GTATTATTTT TCAACCTCAT AGGCTCACTC AGCTTTTGCA TTATCTAGAT TCATAGTTGC
  G
  GCTGGAGAGT CTTCCTTTCT TGCTAGTCTG GGGAGCTCAT TTTGGCATCA CTTCTGCCCC
  AGGCACTGCT GTTCGAAGCT GCTTCCTCTC ATATTTTAC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145932133	ENSMUSSNP6433561	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs47432180					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162069939 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnm3	dynamin 3			Intron
				Noncoding-Transcript-Variant
Rr372349	regulatory region 372349			542 bp upstream
Rr421941	regulatory region 421941			905 bp proximal