rs47423216 SNP Detail

Summary

• ID
  rs47423216
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148044847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAG GCCTTTTCCT TACCTGGGTA
  T
  CATGACCAGT TCCCCCTCTG GATGA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147988227	ENSMUSSNP2425504	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss321416035	CHEV_4_147334499	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47423216					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148044847 () rs orientation: forward

Symbol	Name	Function Class
Gm69767	predicted gene, 69767	1356 bp downstream
Rr407044	regulatory region 407044	1894 bp proximal
Rr604535	regulatory region 604535	within coordinates
Rr604536	regulatory region 604536	22 bp distal