rs47406455 SNP Detail

Summary

• ID
  rs47406455
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:71955586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCCCTAAG ATAGCAGCAT TGTCTGCCCA GCCTGGAGGA
  CCTGGGGGTG GGCACAGCTG ACAGTACAGA GTGACATAGC AAAGCAGTAG CCTTGGGGTC
  S
  GGAAAGCAGA TGGCCTGAGC TGGGCCGGCT TCCCTCAGAA AAGGCTCCTC CTACCTAGCC
  TTTCTCATCT CGGGATCAGG AGCAAGGCTT CCCAAGCCC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133280753	ENSMUSSNP4636257	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
ss321819991	CHEV_6_71928596	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47406455					SNP	C	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71955586 () rs orientation: forward

Symbol	Name	Function Class
Gm68334	predicted gene, 68334	within coordinates
Polr1a	polymerase (RNA) I polypeptide A	mRNA-UTR
Rr632036	regulatory region 632036	1412 bp proximal