rs47382582 SNP Detail

Summary

• ID
  rs47382582
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49823850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACCTGTTCA CCTATGTAAG GAGAAGGAAT GGTTAAACTT
  AAAAAAAGTC AGGATCCTCA CTAACAAAAC CTGTTCATCT ATCTATACTT TACCATGGTA
  R
  GCGGCTCCTT GTTGCATATT TTAGCCAATA GAACAATTAA TAAAGAAATA GCTATGGTTC
  AGAAGAAAAA AATGAAGATT AAAAACACAG AGATATCAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135145511	ENSMUSSNP2799452	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47382582					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49823850 () rs orientation: forward

Symbol	Name	Function Class
Rr576118	regulatory region 576118	982 bp distal
Rr576119	regulatory region 576119	1419 bp proximal