rs47368282 SNP Detail

Summary

• ID
  rs47368282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:10009259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTCTGAT CAAAATCAAT
  TAAATGTACT AATGATTTGA AAAACTACTA AGAGGCTAAA TCAGAAGGGT TGTTTGAGCT
  CAGAAATACA ATGTCATGTT AGACTATACA TAATAAGACT TTAATAATAA GTTTAATAAT
  AAGTCTAATA AGACTTTCTG GAAGTTTCAT ACAGTTGCAT TTATTGATTA TGCTATGTAC
  Y
  CTTATAAGAT AGTTGAAGGC TTGAGGACGC ACATGTGGAT TGGAAACATG CCTTCATGGT
  CATAGAATAT GAAGGATCAT TGGCAAGATT ATTAGACCTG TAAAAATCAA TGAAAAGAGA
  ATGCAAGTAC TAAAAATCAT AAACCAAGAA CATAAAAATT TAGTTTTATT TTCTACTCAT
  CTATAAAATA AACTATTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148312523	ENSMUSSNP4870264	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
ss322101819	CHEV_7_10860681	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47368282					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:10009259 () rs orientation: forward

Symbol	Name	Function Class
Gm71895	predicted gene, 71895	within coordinates
Vmn1r66	vomeronasal 1 receptor 66	mRNA-UTR