rs47366089 SNP Detail

Summary

• ID
  rs47366089
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:132684495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATGAAGTC ACCTTGATCA ATGGAGAAAA TGTAATTCTT
  TTGTTTTTTC AGGGTTTCTC TGTAGCCCTG GCTGTCCTGG AACTCACTCT GTAGACCAGG
  C
  TGGCCTGGAA CTCAGAAATC TGCCTGCCTC TGCCTCTGAA GTGCTGGGAT TAAAGGCATA
  CGCCATCACT GCCTGGCTTT TCTTTTGCTT TTTGTTTTT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135915694	ENSMUSSNP4215464	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47366089					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132684495 () rs orientation: forward

Symbol	Name	Function Class
Rr585492	regulatory region 585492	1514 bp proximal
Tssr35743	transcription start site region 35743	1523 bp upstream