rs47364879 SNP Detail

Summary

• ID
  rs47364879
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108729677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACCCCACAC CCCCCACACT CTCCCCCTCC CCGCAACCCA
  TATCTTAGCA TCAACAAAAC GGCTCTGCTG GCTTGTAAAT TCTGAGAAGT CTGGGAGAAC
  R
  AGGGTTCCCC CAAGTGGTGT GTGGTTATTC GTCCTCTACT ACAAAGCATA GGTTTCCTGA
  AACCTCACTG TTACCCTTGT ATTTTAAAGA TGTTTTAGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133508752	ENSMUSSNP4167621	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss321893986	CHEV_6_108702710	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47364879					SNP	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108729677 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	1 bp proximal
Rr636194	regulatory region 636194	1189 bp proximal