rs47363216 SNP Detail

Summary

• ID
  rs47363216
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156032773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGAAGCTG CTGGGTGCTG
  GGCTCAGTGG CGCTGAGGCT CTGGGAGGTC TAGCCCTGTG TCTGTGGTTC TAGCTTCCTG
  AGTTCTCACT CTGATGGCAG AGCTCTCTTC CGCTGGGACC TACTCAAGAG GTTCTGCTCA
  TCGCGACTGT GAGAGATAAG GAGCTTGCTT CTCTATTTTG AATCTCACCT CTCCCCCTAC
  Y
  CCACACCCTG TTTCTAGGAC AGACTTCCTT GTAAATGTCC TAAGGTTGTG TATTAAGGTT
  TAGCCAGACA GGTTTGAGAA AGATGAGTTT CCTAGTTTAG TATCTTTTTT GTTGGTTTTG
  TTTCCCCAGA CAGAGTTTCT CTGTGTAGCC TTGACTGGTC CTGGAACTTG CTCTAACAAT
  CAGGCTAGCC TTGAACTCGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320578114	CHEV_2_156016589	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47363216					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156032773 () rs orientation: forward

Symbol	Name	Function Class
Rr568204	regulatory region 568204	1930 bp distal
Rr568205	regulatory region 568205	within coordinates
Rr568206	regulatory region 568206	645 bp proximal
Rr568207	regulatory region 568207	858 bp proximal