rs47362862 SNP Detail

Summary

• ID
  rs47362862
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143448485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCCC TCTGTTCATT GCTTCTCTGT
  G
  TTTGTGGCTC TTTTCCTCCC TTAAC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136026114	ENSMUSSNP5284931	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321005977	CHEV_3_143405688	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47362862					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143448485 () rs orientation: forward

Symbol	Name	Function Class
Gm33867	predicted gene, 33867	554 bp upstream
Gm42705	predicted gene 42705	653 bp upstream
Rr586558	regulatory region 586558	163 bp proximal
Rr586559	regulatory region 586559	252 bp proximal
Rr586560	regulatory region 586560	664 bp proximal